Last updated on 2025-03-09 21:50:11 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.1.0 | 15.88 | 411.26 | 427.14 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.1.0 | 11.51 | 300.66 | 312.17 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.1.0 | 470.56 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 2.1.0 | 503.32 | ERROR | |||
| r-devel-macos-arm64 | 2.1.0 | 329.00 | OK | |||
| r-devel-macos-x86_64 | 2.1.0 | 460.00 | OK | |||
| r-devel-windows-x86_64 | 2.1.0 | 16.00 | 395.00 | 411.00 | OK | |
| r-patched-linux-x86_64 | 2.1.0 | 14.41 | 407.96 | 422.37 | OK | |
| r-release-linux-x86_64 | 2.1.0 | 15.09 | 405.35 | 420.44 | OK | |
| r-release-macos-arm64 | 2.1.0 | 335.00 | OK | |||
| r-release-macos-x86_64 | 2.1.0 | 346.00 | OK | |||
| r-release-windows-x86_64 | 2.1.0 | 14.00 | 389.00 | 403.00 | OK | |
| r-oldrel-macos-arm64 | 2.1.0 | OK | ||||
| r-oldrel-macos-x86_64 | 2.1.0 | 362.00 | OK | |||
| r-oldrel-windows-x86_64 | 2.1.0 | 18.00 | 462.00 | 480.00 | OK |
Version: 2.1.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘vignette.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-1-1.png
672x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 18089 bytes
Input file size = 18971 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16966
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16966
Output IDAT size = 16966 bytes (1123 bytes decrease)
Output file size = 17044 bytes (1927 bytes = 10.16% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-2-1.png
672x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 20132 bytes
Input file size = 21014 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19134
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 19095
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 19095
Output IDAT size = 19095 bytes (1037 bytes decrease)
Output file size = 19173 bytes (1841 bytes = 8.76% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-3-1.png
672x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 37082 bytes
Input file size = 37208 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27056
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27056
Output IDAT size = 27056 bytes (10026 bytes decrease)
Output file size = 27134 bytes (10074 bytes = 27.07% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-4-1.png
672x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 20535 bytes
Input file size = 21417 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19542
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 19493
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 19493
Output IDAT size = 19493 bytes (1042 bytes decrease)
Output file size = 19571 bytes (1846 bytes = 8.62% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-5-1.png
672x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 18051 bytes
Input file size = 18933 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16997
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16997
Output IDAT size = 16997 bytes (1054 bytes decrease)
Output file size = 17075 bytes (1858 bytes = 9.81% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-6-1.png
672x672 pixels, 8 bits/pixel, 216 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 12136 bytes
Input file size = 12886 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10118
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10118
Output IDAT size = 10118 bytes (2018 bytes decrease)
Output file size = 10196 bytes (2690 bytes = 20.88% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-8-1.png
672x672 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 44889 bytes
Input file size = 45027 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34971
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34971
Output IDAT size = 34971 bytes (9918 bytes decrease)
Output file size = 35049 bytes (9978 bytes = 22.16% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-9-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 30483 bytes
Input file size = 31377 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27622
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 27418
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 25577
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 25098
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 25098
Output IDAT size = 25098 bytes (5385 bytes decrease)
Output file size = 25176 bytes (6201 bytes = 19.76% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-10-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 27353 bytes
Input file size = 28247 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24736
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 24569
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 24178
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 23719
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 23719
Output IDAT size = 23719 bytes (3634 bytes decrease)
Output file size = 23797 bytes (4450 bytes = 15.75% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-12-1.png
672x624 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 79700 bytes
Input file size = 79886 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61082
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61082
Output IDAT size = 61082 bytes (18618 bytes decrease)
Output file size = 61160 bytes (18726 bytes = 23.44% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-12-2.png
672x624 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 135495 bytes
Input file size = 135765 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 81286
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 81286
Output IDAT size = 81286 bytes (54209 bytes decrease)
Output file size = 81364 bytes (54401 bytes = 40.07% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-13-1.png
384x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 171387 bytes
Input file size = 171705 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 116213
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 116213
Output IDAT size = 116213 bytes (55174 bytes decrease)
Output file size = 116291 bytes (55414 bytes = 32.27% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-14-1.png
672x672 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 246983 bytes
Input file size = 247421 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 139329
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 139329
Output IDAT size = 139329 bytes (107654 bytes decrease)
Output file size = 139407 bytes (108014 bytes = 43.66% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-15-1.png
672x672 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 188645 bytes
Input file size = 188999 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103004
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103004
Output IDAT size = 103004 bytes (85641 bytes decrease)
Output file size = 103082 bytes (85917 bytes = 45.46% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-16-1.png
672x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 16986 bytes
Input file size = 17868 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15999
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15999
Output IDAT size = 15999 bytes (987 bytes decrease)
Output file size = 16077 bytes (1791 bytes = 10.02% decrease)
Quitting from lines 405-412 [unnamed-chunk-17] (vignette.Rmd)
Error: processing vignette 'vignette.Rmd' failed with diagnostics:
'to' must be a finite number
--- failed re-building ‘vignette.Rmd’
SUMMARY: processing the following file failed:
‘vignette.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 2.1.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘vignette.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-1-1.png
672x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 17415 bytes
Input file size = 18297 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16374
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16374
Output IDAT size = 16374 bytes (1041 bytes decrease)
Output file size = 16452 bytes (1845 bytes = 10.08% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-2-1.png
672x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 21574 bytes
Input file size = 22456 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20555
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20555
Output IDAT size = 20555 bytes (1019 bytes decrease)
Output file size = 20633 bytes (1823 bytes = 8.12% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-3-1.png
672x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 37082 bytes
Input file size = 37208 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27056
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27056
Output IDAT size = 27056 bytes (10026 bytes decrease)
Output file size = 27134 bytes (10074 bytes = 27.07% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-4-1.png
672x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 19955 bytes
Input file size = 20837 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18910
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18910
Output IDAT size = 18910 bytes (1045 bytes decrease)
Output file size = 18988 bytes (1849 bytes = 8.87% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-5-1.png
672x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 18793 bytes
Input file size = 19675 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17739
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17739
Output IDAT size = 17739 bytes (1054 bytes decrease)
Output file size = 17817 bytes (1858 bytes = 9.44% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-6-1.png
672x672 pixels, 8 bits/pixel, 215 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 11475 bytes
Input file size = 12222 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9512
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9512
Output IDAT size = 9512 bytes (1963 bytes decrease)
Output file size = 9590 bytes (2632 bytes = 21.53% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-8-1.png
672x672 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 44889 bytes
Input file size = 45027 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34971
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34971
Output IDAT size = 34971 bytes (9918 bytes decrease)
Output file size = 35049 bytes (9978 bytes = 22.16% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-9-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 25361 bytes
Input file size = 26255 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 22595
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 22581
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 22361
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 22361
Output IDAT size = 22361 bytes (3000 bytes decrease)
Output file size = 22439 bytes (3816 bytes = 14.53% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-10-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 32837 bytes
Input file size = 33743 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 30323
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 30121
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 29639
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 29053
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 29053
Output IDAT size = 29053 bytes (3784 bytes decrease)
Output file size = 29131 bytes (4612 bytes = 13.67% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-12-1.png
672x624 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 80463 bytes
Input file size = 80649 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61406
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61406
Output IDAT size = 61406 bytes (19057 bytes decrease)
Output file size = 61484 bytes (19165 bytes = 23.76% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-12-2.png
672x624 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 70290 bytes
Input file size = 70464 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45129
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45129
Output IDAT size = 45129 bytes (25161 bytes decrease)
Output file size = 45207 bytes (25257 bytes = 35.84% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-13-1.png
384x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 171387 bytes
Input file size = 171705 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 116213
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 116213
Output IDAT size = 116213 bytes (55174 bytes decrease)
Output file size = 116291 bytes (55414 bytes = 32.27% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-14-1.png
672x672 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 275248 bytes
Input file size = 275722 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 150241
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 150241
Output IDAT size = 150241 bytes (125007 bytes decrease)
Output file size = 150319 bytes (125403 bytes = 45.48% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-15-1.png
672x672 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 225581 bytes
Input file size = 225983 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 116304
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 116304
Output IDAT size = 116304 bytes (109277 bytes decrease)
Output file size = 116382 bytes (109601 bytes = 48.50% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-16-1.png
672x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 16986 bytes
Input file size = 17868 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15999
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15999
Output IDAT size = 15999 bytes (987 bytes decrease)
Output file size = 16077 bytes (1791 bytes = 10.02% decrease)
Quitting from lines 405-412 [unnamed-chunk-17] (vignette.Rmd)
Error: processing vignette 'vignette.Rmd' failed with diagnostics:
'to' must be a finite number
--- failed re-building ‘vignette.Rmd’
SUMMARY: processing the following file failed:
‘vignette.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc