Last updated on 2024-12-22 01:49:12 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.1 | 628.55 | 346.38 | 974.93 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.0.1 | 539.50 | 383.71 | 923.21 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.0.1 | 1712.37 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0.1 | 2207.25 | NOTE | |||
| r-devel-windows-x86_64 | 1.0.1 | 547.00 | 529.00 | 1076.00 | OK | |
| r-patched-linux-x86_64 | 1.0.1 | 711.14 | 517.09 | 1228.23 | OK | |
| r-release-linux-x86_64 | 1.0.1 | 694.68 | 519.21 | 1213.89 | OK | |
| r-release-macos-arm64 | 1.0.1 | 433.00 | NOTE | |||
| r-release-macos-x86_64 | 1.0.1 | 548.00 | NOTE | |||
| r-release-windows-x86_64 | 1.0.1 | 558.00 | 517.00 | 1075.00 | NOTE | |
| r-oldrel-macos-arm64 | 1.0.1 | 409.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 1.0.1 | 601.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 1.0.1 | 735.00 | 645.00 | 1380.00 | NOTE |
Version: 1.0.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘Differential-Synth.Rmd’ using rmarkdown
Quitting from lines 29-42 [setup] (Differential-Synth.Rmd)
Error: processing vignette 'Differential-Synth.Rmd' failed with diagnostics:
there is no package called 'DESeq2'
--- failed re-building ‘Differential-Synth.Rmd’
--- re-building ‘Dropout.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Dropout_files/figure-html/unnamed-chunk-4-1.png
576x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 53610 bytes
Input file size = 53760 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40776
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40776
Output IDAT size = 40776 bytes (12834 bytes decrease)
Output file size = 40854 bytes (12906 bytes = 24.01% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Dropout_files/figure-html/unnamed-chunk-5-1.png
576x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31753 bytes
Input file size = 31867 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24957
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24957
Output IDAT size = 24957 bytes (6796 bytes decrease)
Output file size = 25035 bytes (6832 bytes = 21.44% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Dropout_files/figure-html/unnamed-chunk-6-1.png
576x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 32981 bytes
Input file size = 33107 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25871
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25871
Output IDAT size = 25871 bytes (7110 bytes decrease)
Output file size = 25949 bytes (7158 bytes = 21.62% decrease)
--- finished re-building ‘Dropout.Rmd’
--- re-building ‘Getting-Started.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Getting-Started_files/figure-html/unnamed-chunk-11-1.png
576x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 37454 bytes
Input file size = 37580 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 29364
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 29364
Output IDAT size = 29364 bytes (8090 bytes decrease)
Output file size = 29442 bytes (8138 bytes = 21.66% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Getting-Started_files/figure-html/unnamed-chunk-13-1.png
576x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 37509 bytes
Input file size = 37635 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26365
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26365
Output IDAT size = 26365 bytes (11144 bytes decrease)
Output file size = 26443 bytes (11192 bytes = 29.74% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Getting-Started_files/figure-html/unnamed-chunk-14-1.png
576x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 27198 bytes
Input file size = 27312 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20601
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20601
Output IDAT size = 20601 bytes (6597 bytes decrease)
Output file size = 20679 bytes (6633 bytes = 24.29% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Getting-Started_files/figure-html/unnamed-chunk-15-1.png
576x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 14068 bytes
Input file size = 14158 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11989
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11989
Output IDAT size = 11989 bytes (2079 bytes decrease)
Output file size = 12067 bytes (2091 bytes = 14.77% decrease)
--- finished re-building ‘Getting-Started.Rmd’
--- re-building ‘NSS.Rmd’ using rmarkdown
Quitting from lines 32-46 [setup] (NSS.Rmd)
Error: processing vignette 'NSS.Rmd' failed with diagnostics:
there is no package called 'DESeq2'
--- failed re-building ‘NSS.Rmd’
--- re-building ‘Troubleshooting.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-3-1.png
576x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 17817 bytes
Input file size = 17919 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15152
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15152
Output IDAT size = 15152 bytes (2665 bytes decrease)
Output file size = 15230 bytes (2689 bytes = 15.01% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-4-1.png
576x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 18092 bytes
Input file size = 18194 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15926
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15926
Output IDAT size = 15926 bytes (2166 bytes decrease)
Output file size = 16004 bytes (2190 bytes = 12.04% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-5-1.png
576x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31756 bytes
Input file size = 31870 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27835
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27835
Output IDAT size = 27835 bytes (3921 bytes decrease)
Output file size = 27913 bytes (3957 bytes = 12.42% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-6-1.png
576x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 66756 bytes
Input file size = 66930 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 52782
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 52782
Output IDAT size = 52782 bytes (13974 bytes decrease)
Output file size = 52860 bytes (14070 bytes = 21.02% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-7-1.png
576x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 17070 bytes
Input file size = 17172 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 16059
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 16059
Output IDAT size = 16059 bytes (1011 bytes decrease)
Output file size = 16137 bytes (1035 bytes = 6.03% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-11-1.png
576x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33892 bytes
Input file size = 34018 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26477
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26477
Output IDAT size = 26477 bytes (7415 bytes decrease)
Output file size = 26555 bytes (7463 bytes = 21.94% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-11-2.png
576x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 30988 bytes
Input file size = 31102 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24166
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24166
Output IDAT size = 24166 bytes (6822 bytes decrease)
Output file size = 24244 bytes (6858 bytes = 22.05% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-13-1.png
576x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 30761 bytes
Input file size = 30875 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23968
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23968
Output IDAT size = 23968 bytes (6793 bytes decrease)
Output file size = 24046 bytes (6829 bytes = 22.12% decrease)
--- finished re-building ‘Troubleshooting.Rmd’
--- re-building ‘bakR-Fn.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/bakR-Fn_files/figure-html/unnamed-chunk-5-1.png
576x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 27969 bytes
Input file size = 28083 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20270
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20270
Output IDAT size = 20270 bytes (7699 bytes decrease)
Output file size = 20348 bytes (7735 bytes = 27.54% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/bakR-Fn_files/figure-html/unnamed-chunk-6-1.png
576x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 22866 bytes
Input file size = 22968 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16928
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16928
Output IDAT size = 16928 bytes (5938 bytes decrease)
Output file size = 17006 bytes (5962 bytes = 25.96% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/bakR-Fn_files/figure-html/unnamed-chunk-7-1.png
576x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 15494 bytes
Input file size = 15584 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13000
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13000
Output IDAT size = 13000 bytes (2494 bytes decrease)
Output file size = 13078 bytes (2506 bytes = 16.08% decrease)
--- finished re-building ‘bakR-Fn.Rmd’
--- re-building ‘bakR-Quickstart.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/bakR-Quickstart_files/figure-html/unnamed-chunk-5-1.png
576x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 37547 bytes
Input file size = 37673 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26427
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26427
Output IDAT size = 26427 bytes (11120 bytes decrease)
Output file size = 26505 bytes (11168 bytes = 29.64% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/bakR-Quickstart_files/figure-html/unnamed-chunk-6-1.png
576x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 26954 bytes
Input file size = 27068 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20437
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20437
Output IDAT size = 20437 bytes (6517 bytes decrease)
Output file size = 20515 bytes (6553 bytes = 24.21% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/bakR-Quickstart_files/figure-html/unnamed-chunk-7-1.png
576x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 13740 bytes
Input file size = 13830 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11814
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11814
Output IDAT size = 11814 bytes (1926 bytes decrease)
Output file size = 11892 bytes (1938 bytes = 14.01% decrease)
--- finished re-building ‘bakR-Quickstart.Rmd’
SUMMARY: processing the following files failed:
‘Differential-Synth.Rmd’ ‘NSS.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.0.1
Check: dependencies in R code
Result: NOTE
Namespaces in Imports field not imported from:
‘RcppParallel’ ‘rstantools’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.0.1
Check: installed package size
Result: NOTE
installed size is 103.0Mb
sub-directories of 1Mb or more:
libs 101.2Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 1.0.1
Check: for GNU extensions in Makefiles
Result: NOTE
GNU make is a SystemRequirements.
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64