Last updated on 2024-12-22 10:50:17 CET.
| Package | ERROR | WARN | NOTE | OK |
|---|---|---|---|---|
| CREAM | 8 | 5 | ||
| MM2Sdata | 1 | 12 | ||
| mRMRe | 10 | 3 | ||
| SIGN | 4 | 7 | 2 |
Current CRAN status: NOTE: 8, OK: 5
Version: 1.1.1
Check: LazyData
Result: NOTE
'LazyData' is specified without a 'data' directory
Flavors: r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: WARN: 1, OK: 12
Version: 1.0.3
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘MM2Sdata.Rnw’ using knitr
Error: processing vignette 'MM2Sdata.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'MM2Sdata.tex' failed.
LaTeX errors:
! Undefined control sequence.
l.120 \hlkwd{install.packages}\hldef
{(}\hlsng{"MM2Sdata"}\hldef{)}
?
! Emergency stop.
! Emergency stop.
l.120
End of file on the terminal!
! ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘MM2Sdata.Rnw’
SUMMARY: processing the following file failed:
‘MM2Sdata.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-x86_64
Current CRAN status: NOTE: 10, OK: 3
Version: 2.1.2.2
Check: Rd files
Result: NOTE
checkRd: (-1) correlate.Rd:16: Lost braces; missing escapes or markup?
16 | \item{X}{Vector of type {numeric, ordered factor, or Surv}.}
| ^
checkRd: (-1) correlate.Rd:17: Lost braces; missing escapes or markup?
17 | \item{Y}{Vector of type {numeric, ordered factor, or Surv} of same length as \code{X}.}
| ^
checkRd: (-1) correlate.Rd:18: Lost braces; missing escapes or markup?
18 | \item{method}{One of the following values: {pearson, spearman, kendall, frequency, cramersv, or cindex}.}
| ^
checkRd: (-1) correlate.Rd:19: Lost braces; missing escapes or markup?
19 | \item{strata}{Vector of type {factor} corresponding to the sample strata.}
| ^
checkRd: (-1) correlate.Rd:20: Lost braces; missing escapes or markup?
20 | \item{weights}{Vector of type {numeric} corresponding to the sample weights.}
| ^
checkRd: (-1) correlate.Rd:24: Lost braces; missing escapes or markup?
24 | \item{alternative}{a character string specifying the alternative hypothesis,must be one of {two.sided (default), greater or less}. You can specify just the initial letter.}
| ^
checkRd: (-1) mRMRe.Data-class.Rd:20: Lost braces; missing escapes or markup?
20 | have to be of type :{numeric, ordered factor, Surv} and respectively interpreted as :{continuous, discrete and survival} variables.
| ^
checkRd: (-1) mRMRe.Data-class.Rd:20: Lost braces; missing escapes or markup?
20 | have to be of type :{numeric, ordered factor, Surv} and respectively interpreted as :{continuous, discrete and survival} variables.
| ^
checkRd: (-1) mRMRe.Data-class.Rd:22: Lost braces; missing escapes or markup?
22 | \code{strata}: is expected to be a vector of type :{ordered factor} with the strata associated to the samples provided
| ^
checkRd: (-1) mRMRe.Data-class.Rd:25: Lost braces; missing escapes or markup?
25 | \code{weights}: is expected to be a vector of type :{numeric} with the weights associated to the samples provided
| ^
checkRd: (-1) mRMRe.Data-class.Rd:28: Lost braces; missing escapes or markup?
28 | \code{priors}: is expected to be a matrix of type :{numeric} where \code{priors[i, j]}: denotes an forced association between
| ^
checkRd: (-1) mRMRe.Data-class.Rd:34: Lost braces; missing escapes or markup?
34 | using an estimator specified in \code{continuous_estimator}; currently, :{pearson, spearman, kendall, frequency} are supported.
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Current CRAN status: ERROR: 4, NOTE: 7, OK: 2
Version: 0.1.0
Check: package dependencies
Result: ERROR
Package required but not available: ‘GSVA’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 0.1.0
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘utils’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.1.0
Check: LazyData
Result: NOTE
'LazyData' is specified without a 'data' directory
Flavors: r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-windows-x86_64
Version: 0.1.0
Check: whether package can be installed
Result: ERROR
Installation failed.
Flavor: r-release-windows-x86_64