CRAN Package Check Results for Maintainer ‘Benjamin Christoffersen <boennecd at gmail.com>’

Last updated on 2024-05-02 00:59:18 CEST.

Package ERROR NOTE OK
DtD 12
mdgc 11 1
mmcif 3 9
parglm 12
pedmod 12
psqn 1 11
SimSurvNMarker 12
VAJointSurv 3 9

Package DtD

Current CRAN status: NOTE: 12

Version: 0.2.2
Check: C++ specification
Result: NOTE Specified C++11: please drop specification unless essential Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 0.2.2
Check: LazyData
Result: NOTE 'LazyData' is specified without a 'data' directory Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package mdgc

Current CRAN status: NOTE: 11, OK: 1

Version: 0.1.7
Check: Rd files
Result: NOTE checkRd: (-1) get_mdgc.Rd:34: Lost braces in \itemize; meant \describe ? checkRd: (-1) get_mdgc.Rd:35: Lost braces in \itemize; meant \describe ? checkRd: (-1) get_mdgc.Rd:36: Lost braces in \itemize; meant \describe ? checkRd: (-1) get_mdgc.Rd:37: Lost braces in \itemize; meant \describe ? Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-x86_64

Version: 0.1.7
Check: installed package size
Result: NOTE installed size is 10.7Mb sub-directories of 1Mb or more: libs 10.3Mb Flavors: r-release-macos-arm64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package mmcif

Current CRAN status: NOTE: 3, OK: 9

Version: 0.1.1
Check: installed package size
Result: NOTE installed size is 16.8Mb sub-directories of 1Mb or more: doc 1.3Mb libs 15.0Mb Flavors: r-release-macos-arm64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package parglm

Current CRAN status: NOTE: 12

Version: 0.1.7
Check: C++ specification
Result: NOTE Specified C++11: please drop specification unless essential Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package pedmod

Current CRAN status: NOTE: 12

Version: 0.2.4
Check: Rd files
Result: NOTE checkRd: (-1) pedigree_ll_terms.Rd:16: Lost braces in \itemize; meant \describe ? checkRd: (-1) pedigree_ll_terms.Rd:17: Lost braces in \itemize; meant \describe ? checkRd: (-1) pedigree_ll_terms.Rd:18: Lost braces in \itemize; meant \describe ? checkRd: (-1) pedigree_ll_terms.Rd:19-20: Lost braces in \itemize; meant \describe ? Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-x86_64

Version: 0.2.4
Check: installed package size
Result: NOTE installed size is 5.9Mb sub-directories of 1Mb or more: doc 4.0Mb libs 1.7Mb Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package psqn

Current CRAN status: ERROR: 1, NOTE: 11

Version: 0.3.1
Check: C++ specification
Result: NOTE Specified C++11: please drop specification unless essential Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 0.3.1
Check: tests
Result: ERROR Running ‘testthat.R’ [39s/50s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(psqn) Loading required package: Matrix > > test_check("psqn") using C++ compiler: ‘Debian clang version 18.1.4 (1)’ using C++11 make[1]: Entering directory '/tmp/RtmpiaYvbX/sourceCpp-x86_64-pc-linux-gnu-1.0.12/sourcecpp_1c34515a5c01af' clang++-18 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/psqn/include" -I"/tmp/RtmpiaYvbX/tmp-psqn-cpp-dir" -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion -c mlogit-ex.cpp -o mlogit-ex.o In file included from mlogit-ex.cpp:23: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/psqn/include/psqn-Rcpp-wrapper.h:6:10: fatal error: 'omp.h' file not found 6 | #include <omp.h> | ^~~~~~~ 1 error generated. make[1]: *** [/home/hornik/tmp/R.check/r-devel-clang/Work/build/etc/Makeconf:202: mlogit-ex.o] Error 1 make[1]: Leaving directory '/tmp/RtmpiaYvbX/sourceCpp-x86_64-pc-linux-gnu-1.0.12/sourcecpp_1c34515a5c01af' using C++ compiler: ‘Debian clang version 18.1.4 (1)’ using C++11 make[1]: Entering directory '/tmp/RtmpiaYvbX/sourceCpp-x86_64-pc-linux-gnu-1.0.12/sourcecpp_1c345138511194' clang++-18 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/psqn/include" -I"/tmp/RtmpiaYvbX/tmp-psqn-cpp-dir" -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion -c poly-ex.cpp -o poly-ex.o In file included from poly-ex.cpp:11: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/psqn/include/psqn.h:6: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/psqn/include/lp.h:12:10: fatal error: 'omp.h' file not found 12 | #include <omp.h> | ^~~~~~~ 1 error generated. make[1]: *** [/home/hornik/tmp/R.check/r-devel-clang/Work/build/etc/Makeconf:202: poly-ex.o] Error 1 make[1]: Leaving directory '/tmp/RtmpiaYvbX/sourceCpp-x86_64-pc-linux-gnu-1.0.12/sourcecpp_1c345138511194' [ FAIL 2 | WARN 0 | SKIP 1 | PASS 20 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-psqn-generic.R:76:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-cpp-api.R:35:3'): mixed logit model gives the same ───────────── Error in `Rcpp::sourceCpp(new_name)`: Error 1 occurred building shared library. Backtrace: ▆ 1. └─psqn:::compile_cpp_file("mlogit-ex.cpp") at test-cpp-api.R:35:3 2. └─Rcpp::sourceCpp(new_name) at tests/testthat/helper.R:30:3 ── Error ('test-poly-ex.R:50:5'): Poly example gives the same ────────────────── Error in `sourceCpp("poly-ex.cpp")`: Error 1 occurred building shared library. Backtrace: ▆ 1. └─(function() {... at test-poly-ex.R:36:3 2. └─Rcpp::sourceCpp("poly-ex.cpp") at test-poly-ex.R:50:5 [ FAIL 2 | WARN 0 | SKIP 1 | PASS 20 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.3.1
Check: installed package size
Result: NOTE installed size is 11.1Mb sub-directories of 1Mb or more: libs 10.4Mb Flavors: r-release-macos-arm64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package SimSurvNMarker

Current CRAN status: NOTE: 12

Version: 0.1.3
Check: C++ specification
Result: NOTE Specified C++14: please drop specification unless essential Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package VAJointSurv

Current CRAN status: NOTE: 3, OK: 9

Version: 0.1.0
Check: installed package size
Result: NOTE installed size is 23.9Mb sub-directories of 1Mb or more: doc 2.2Mb libs 21.5Mb Flavors: r-release-macos-arm64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64