Last updated on 2024-12-22 10:50:18 CET.
| Package | FAIL | NOTE | OK |
|---|---|---|---|
| qtl2ggplot | 9 | 4 | |
| qtl2pattern | 13 | ||
| qtlhot | 1 | 12 | |
| qtlnet | 13 |
Current CRAN status: NOTE: 9, OK: 4
Version: 1.2.4
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
ggplot_pxg.Rd: plot_coef
ggplot_scan1.Rd: plot_snpasso
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 1.2.4
Check: installed package size
Result: NOTE
installed size is 5.3Mb
sub-directories of 1Mb or more:
doc 4.4Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: FAIL: 1, OK: 12
Version: 1.0.4
Check: re-building of vignette outputs
Result: FAIL
Check process probably crashed or hung up for 20 minutes ... killed
Most likely this happened in the example checks (?),
if not, ignore the following last lines of example output:
> ## Not run:
> ##D ## All unspecified objects come from vignette qtlhot.
> ##D set.seed(12345)
> ##D Q.1 <- ww.perm(high1, n.perm = 100, lod.thrs, alphas)
> ##D Q.1.thr <- summary(Q.1, alphas)
> ##D Q.1.thr
> ##D diag(Q.1.thr)
> ##D
> ##D set.seed(12345)
> ##D Q.2 <- ww.perm(high2, 100, lod.thrs, alphas)
> ##D Q.2.thr <- summary(Q.2, alphas)
> ## End(Not run)
>
>
>
> ### * <FOOTER>
> ###
> cleanEx()
> options(digits = 7L)
> base::cat("Time elapsed: ", proc.time() - base::get("ptime", pos = 'CheckExEnv'),"\n")
Time elapsed: 5.97 0.36 6.33 NA NA
> grDevices::dev.off()
null device
1
> ###
> ### Local variables: ***
> ### mode: outline-minor ***
> ### outline-regexp: "\\(> \\)?### [*]+" ***
> ### End: ***
> quit('no')
======== End of example output (where/before crash/hang up occured ?) ========
Flavor: r-devel-windows-x86_64
Current CRAN status: OK: 13