Last updated on 2024-12-22 10:50:19 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| Peptides | 13 | ||
| retriever | 3 | 10 | |
| rPanglaoDB | 1 | 12 | |
| SCORPION | 2 | 11 |
Current CRAN status: OK: 13
Current CRAN status: NOTE: 3, OK: 10
Version: 0.2.1
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘ccdata’
Flavors: r-release-macos-arm64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Current CRAN status: ERROR: 1, OK: 12
Version: 0.2.1
Check: examples
Result: ERROR
Running examples in ‘rPanglaoDB-Ex.R’ failed
The error most likely occurred in:
> ### Name: getSampleComposition
> ### Title: Get the cell-type content for each sample from the panglaoDB
> ### database.
> ### Aliases: getSampleComposition
>
> ### ** Examples
>
> # From PanglaoDB
> # https://panglaodb.se/list_clusters_and_cell_types.html?sra=SRA689041&srs=SRS3166675
>
> SRS3166675 <- getSampleComposition(srs = 'SRS3166675')
Error in curl::curl_download(url, file, quiet = quiet, mode = mode, handle = handle) :
Timeout was reached: [] Failed to connect to panglaodb.se port 443 after 10008 ms: Timeout was reached
Calls: getSampleComposition -> getSampleList -> <Anonymous> -> <Anonymous>
Execution halted
Flavor: r-release-macos-arm64
Current CRAN status: NOTE: 2, OK: 11
Version: 1.0.2
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘RhpcBLASctl’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc