Last updated on 2024-12-22 10:50:19 CET.
| Package | WARN | NOTE | OK |
|---|---|---|---|
| fastJT | 1 | 12 | |
| groupedSurv | 1 | 3 | 9 |
| snplist | 1 | 3 | 9 |
| survSNP | 1 | 12 |
Current CRAN status: WARN: 1, NOTE: 12
Version: 1.0.6
Check: C++ specification
Result: NOTE
Specified C++11: please drop specification unless essential
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 1.0.6
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
fastJT-package.Rd: Rcpp
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 1.0.6
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘fastJT.Rnw’ using knitr
Error: processing vignette 'fastJT.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'fastJT.tex' failed.
LaTeX errors:
! Undefined control sequence.
l.5 \hldef
{res} \hlkwb{<-} \hlkwd{fastJT}\hldef{(Y, X,} \hlkwc{outTopN}\hlde...
?
! Emergency stop.
l.5
End of file on the terminal!
! ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘fastJT.Rnw’
SUMMARY: processing the following file failed:
‘fastJT.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-x86_64
Current CRAN status: WARN: 1, NOTE: 3, OK: 9
Version: 1.0.5.1
Check: installed package size
Result: NOTE
installed size is 9.7Mb
sub-directories of 1Mb or more:
libs 9.3Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 1.0.5.1
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘groupedSurv.Rnw’ using knitr
Error: processing vignette 'groupedSurv.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'groupedSurv.tex' failed.
LaTeX errors:
! Undefined control sequence.
l.7 \hlkwd{thetaEst}\hldef
{(}\hlkwc{Z}\hldef{=}\hlkwa{NULL}\hldef{, gtime, d...
?
! Emergency stop.
l.7
End of file on the terminal!
! ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘groupedSurv.Rnw’
SUMMARY: processing the following file failed:
‘groupedSurv.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-x86_64
Current CRAN status: WARN: 1, NOTE: 3, OK: 9
Version: 0.18.2
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
snplist-package.Rd: Rcpp
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 0.18.2
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘snplist.Rnw’ using knitr
Error: processing vignette 'snplist.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'snplist.tex' failed.
LaTeX errors:
! Undefined control sequence.
l.8 \hldef
{genes} \hlkwb{<-} \hlkwd{c}\hldef{(}\hlsng{"BRCA1"}\hldef{,}\hlsn...
?
! Emergency stop.
l.8
End of file on the terminal!
! ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘snplist.Rnw’
SUMMARY: processing the following file failed:
‘snplist.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-x86_64
Current CRAN status: WARN: 1, OK: 12
Version: 0.26
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘survSNP.Rnw’ using knitr
Error: processing vignette 'survSNP.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'survSNP.tex' failed.
LaTeX errors:
! Undefined control sequence.
l.76 \hlkwd{library}\hldef
{(survSNP)}
?
! Emergency stop.
! Emergency stop.
l.76
End of file on the terminal!
! ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘survSNP.Rnw’
SUMMARY: processing the following file failed:
‘survSNP.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-x86_64