CRAN Package Check Results for Maintainer ‘Frederic Bertrand <frederic.bertrand at utt.fr>’

Last updated on 2024-12-22 10:50:21 CET.

Package ERROR WARN NOTE OK
bigalgebra 13
BioStatR 13
bootPLS 13
c060 3 10
Cascade 13
CascadeData 13
granova 13
mi4p 2 11
ModStatR 4 9
networkABC 13
OneTwoSamples 10 3
Patterns 1 12
penalizedSVM 13
peperr 13
plsdepot 13
plsdof 13
plspm 1 3 9
plsRbeta 3 10
plsRcox 1 12
plsRglm 3 10
robustfa 1 3 9
sageR 13
SelectBoost 1 12
survAUC 13
tester 1 12
turner 1 12

Package bigalgebra

Current CRAN status: OK: 13

Additional issues

rchk

Package BioStatR

Current CRAN status: OK: 13

Package bootPLS

Current CRAN status: OK: 13

Package c060

Current CRAN status: NOTE: 3, OK: 10

Version: 0.3-0
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: balancedFolds.Rd: EPSGO coef.intsearch.Rd: EPSGO plot.summary.int.Rd: EPSGO stabpath.Rd: glmnet summary.intsearch.Rd: EPSGO Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Package Cascade

Current CRAN status: OK: 13

Package CascadeData

Current CRAN status: OK: 13

Package granova

Current CRAN status: OK: 13

Package mi4p

Current CRAN status: NOTE: 2, OK: 11

Version: 1.2
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'DAPAR', 'ProteoMM' Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package ModStatR

Current CRAN status: NOTE: 4, OK: 9

Version: 1.3.3
Check: installed package size
Result: NOTE installed size is 5.6Mb sub-directories of 1Mb or more: data 5.3Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package networkABC

Current CRAN status: OK: 13

Package OneTwoSamples

Current CRAN status: NOTE: 10, OK: 3

Version: 1.1-0
Check: Rd files
Result: NOTE checkRd: (-1) one_sample.Rd:40: Lost braces; missing escapes or markup? 40 | In two sided or one sided interval estimation of \code{sigma^2} of one normal sample, {side} is a parameter used to control whether to compute two sided or one sided interval estimation. When computing the one sided upper limit, input \code{side = -1}; when computing the one sided lower limit, input \code{side = 1}; when computing the two sided limits, input \code{side = 0} (default). | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Package Patterns

Current CRAN status: ERROR: 1, OK: 12

Version: 1.5
Check: package dependencies
Result: ERROR Package required but not available: ‘SelectBoost’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-devel-linux-x86_64-debian-gcc

Package penalizedSVM

Current CRAN status: OK: 13

Package peperr

Current CRAN status: OK: 13

Package plsdepot

Current CRAN status: OK: 13

Package plsdof

Current CRAN status: OK: 13

Package plspm

Current CRAN status: WARN: 1, NOTE: 3, OK: 9

Version: 0.5.1
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: innerplot.Rd: plotmat outerplot.Rd: plotmat plot.plspm.Rd: plotmat Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Version: 0.5.1
Check: re-building of vignette outputs
Result: WARN Error(s) in re-building vignettes: ... --- re-building ‘plspm_introduction.Rnw’ using knitr Error: processing vignette 'plspm_introduction.Rnw' failed with diagnostics: Running 'texi2dvi' on 'plspm_introduction.tex' failed. LaTeX errors: ! Undefined control sequence. l.120 \hlkwd{install.packages}\hldef {(}\hlsng{"plspm"}\hldef{)} ? ! Emergency stop. ! Emergency stop. l.120 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘plspm_introduction.Rnw’ SUMMARY: processing the following file failed: ‘plspm_introduction.Rnw’ Error: Vignette re-building failed. Execution halted Flavor: r-release-macos-x86_64

Package plsRbeta

Current CRAN status: NOTE: 3, OK: 10

Version: 0.3.0
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: PLS_beta_wvc.Rd: PLS_glm_kfoldcv_formula, PLS_lm_wvc Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Package plsRcox

Current CRAN status: ERROR: 1, OK: 12

Version: 1.7.7
Check: package dependencies
Result: ERROR Package required but not available: ‘mixOmics’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-devel-linux-x86_64-debian-clang

Package plsRglm

Current CRAN status: NOTE: 3, OK: 10

Version: 1.5.1
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: signpred.Rd: visweb Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Package robustfa

Current CRAN status: WARN: 1, NOTE: 3, OK: 9

Version: 1.1-0
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: FaCov.Rd: CovControl-class, CovControlMcd-class, CovMcd, CovClassic myplotDD.Rd: CovClassic, getDistance Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Version: 1.1-0
Check: re-building of vignette outputs
Result: WARN Error(s) in re-building vignettes: ... --- re-building ‘robustfa-knitr.Rnw’ using knitr Error: processing vignette 'robustfa-knitr.Rnw' failed with diagnostics: Running 'texi2dvi' on 'robustfa-knitr.tex' failed. LaTeX errors: ! Undefined control sequence. l.1481 \hldef {faCovPcaRegMcd} \hlkwb{=} \hlkwd{FaCov}\hldef{(}\hlkwc{x} \h... ? ! Emergency stop. l.1481 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘robustfa-knitr.Rnw’ SUMMARY: processing the following file failed: ‘robustfa-knitr.Rnw’ Error: Vignette re-building failed. Execution halted Flavor: r-release-macos-x86_64

Package sageR

Current CRAN status: OK: 13

Package SelectBoost

Current CRAN status: ERROR: 1, OK: 12

Version: 2.2.2
Check: package dependencies
Result: ERROR Package required but not available: ‘Rfast’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-devel-linux-x86_64-debian-gcc

Package survAUC

Current CRAN status: OK: 13

Package tester

Current CRAN status: WARN: 1, OK: 12

Version: 0.2.0
Check: re-building of vignette outputs
Result: WARN Error(s) in re-building vignettes: ... --- re-building ‘tester_introduction.Rnw’ using knitr Error: processing vignette 'tester_introduction.Rnw' failed with diagnostics: Running 'texi2dvi' on 'tester_introduction.tex' failed. LaTeX errors: ! Undefined control sequence. l.98 \hldef {object} \hlkwb{=} \hlkwd{matrix}\hldef{(letters[}\hlnum{1}\hlopt... ? ! Emergency stop. l.98 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘tester_introduction.Rnw’ SUMMARY: processing the following file failed: ‘tester_introduction.Rnw’ Error: Vignette re-building failed. Execution halted Flavor: r-release-macos-x86_64

Package turner

Current CRAN status: WARN: 1, OK: 12

Version: 0.1.9
Check: re-building of vignette outputs
Result: WARN Error(s) in re-building vignettes: ... --- re-building ‘turner_introduction.Rnw’ using knitr Error: processing vignette 'turner_introduction.Rnw' failed with diagnostics: Running 'texi2dvi' on 'turner_introduction.tex' failed. LaTeX errors: ! Undefined control sequence. l.114 \hlkwd{library}\hldef {(turner)} ? ! Emergency stop. ! Emergency stop. l.114 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘turner_introduction.Rnw’ SUMMARY: processing the following file failed: ‘turner_introduction.Rnw’ Error: Vignette re-building failed. Execution halted Flavor: r-release-macos-x86_64