CRAN Package Check Results for Package gimap

Last updated on 2025-03-09 22:52:56 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.2 8.12 80.26 88.38 ERROR
r-devel-linux-x86_64-debian-gcc 1.0.3 6.81 64.59 71.40 OK
r-devel-linux-x86_64-fedora-clang 1.0.3 154.63 OK
r-devel-linux-x86_64-fedora-gcc 1.0.2 162.71 OK
r-devel-macos-arm64 1.0.3 56.00 OK
r-devel-macos-x86_64 1.0.3 114.00 OK
r-devel-windows-x86_64 1.0.2 9.00 106.00 115.00 OK
r-patched-linux-x86_64 1.0.2 8.40 76.17 84.57 ERROR
r-release-linux-x86_64 1.0.3 8.00 76.95 84.95 OK
r-release-macos-arm64 1.0.3 64.00 OK
r-release-macos-x86_64 1.0.3 103.00 OK
r-release-windows-x86_64 1.0.3 13.00 110.00 123.00 OK
r-oldrel-macos-arm64 1.0.3 60.00 OK
r-oldrel-macos-x86_64 1.0.3 106.00 OK
r-oldrel-windows-x86_64 1.0.2 12.00 106.00 118.00 OK

Additional issues

rlibro

Check Details

Version: 1.0.2
Check: examples
Result: ERROR Running examples in ‘gimap-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: setup_data > ### Title: Making a new gimap dataset > ### Aliases: setup_data > > ### ** Examples > > > counts <- get_example_data("count") %>% + dplyr::select(c( + "Day00_RepA", "Day05_RepA", "Day22_RepA", "Day22_RepB", + "Day22_RepC" + )) %>% + as.matrix() Downloading: 1.4 kB Downloading: 1.4 kB Downloading: 1.4 kB Downloading: 1.4 kB Downloading: PP_pgPEN_HeLa_counts.txt | | | 0% | |======================================================================| 100% | | | 0% | | | 1% | |= | 2% | |== | 3% | |=== | 4% | |==== | 6% | |======= | 10% | |========== | 14% | |=========== | 16% | |============= | 18% | |============== | 20% | |=============== | 21% | |================ | 22% | |================= | 24% | |================== | 25% | |=================== | 26% | |=================== | 27% | |==================== | 28% | 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get_example_data -> get_figshare -> writeLines -> file Execution halted Examples with CPU (user + system) or elapsed time > 5s user system elapsed run_qc 5.891 0.088 9.526 Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.0.2
Check: examples
Result: ERROR Running examples in ‘gimap-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: setup_data > ### Title: Making a new gimap dataset > ### Aliases: setup_data > > ### ** Examples > > > counts <- get_example_data("count") %>% + dplyr::select(c( + "Day00_RepA", "Day05_RepA", "Day22_RepA", "Day22_RepB", + "Day22_RepC" + )) %>% + as.matrix() Downloading: 1.4 kB Downloading: 1.4 kB Downloading: 1.4 kB Downloading: 1.4 kB Downloading: PP_pgPEN_HeLa_counts.txt | | | 0% | |======================================================================| 100% | | | 0% | | | 1% | |== | 3% | |===== | 7% | |====== | 9% | |======= | 10% | |======== | 11% | |========= | 13% | |========= | 14% | |========== | 15% | |============= | 19% | |================ | 22% | |================== | 26% | |===================== | 30% | |====================== | 32% | |======================== | 35% | |========================= | 36% | |========================== | 37% | |=========================== | 38% | |=========================== | 39% | |============================ | 41% | |============================== | 43% | |=============================== | 44% | |================================== | 48% | |==================================== | 51% | |======================================= | 55% | |========================================= | 59% | |============================================ | 63% | |============================================== | 66% | |================================================= | 70% | |==================================================== | 74% | |====================================================== | 78% | |========================================================== | 83% | |=========================================================== | 84% | |============================================================ | 86% | |============================================================= | 87% | |============================================================== | 88% | |=============================================================== | 89% | |=============================================================== | 90% | |================================================================ | 91% | |===================================================================== | 98% | |======================================================================| 100% Warning in file(con, "w") : cannot open file '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gimap/extdata/PP_pgPEN_HeLa_counts.txt': Read-only file system Error in file(con, "w") : cannot open the connection Calls: %>% ... get_example_data -> get_figshare -> writeLines -> file Execution halted Flavor: r-patched-linux-x86_64