Last updated on 2024-12-22 10:50:29 CET.
| Package | WARN | NOTE |
|---|---|---|
| kpcalg | 1 | 12 |
Current CRAN status: WARN: 1, NOTE: 12
Version: 1.0.1
Check: Rd files
Result: NOTE
checkRd: (-1) hsic.perm.Rd:36: Lost braces; missing escapes or markup?
36 | Let x and y be two samples of length n. Gram matrices K and L are defined as: \eqn{K_{i,j} = \exp\frac{(x_i-x_j)^2}{\sigma^2}}{K_{i,j} =exp((x_i-x_j)^2/sig^2)} and \eqn{L_{i,j} = \exp\frac{(y_i-y_j)^2}{\sigma^2}}{L_{i,j} =exp((y_i-y_j)^2/sig^2)}. \eqn{H_{i,j} = \delta_{i,j} - \frac{1}{n}}{H_{i,j} = \delta_{i,j} - 1/n}. Let \eqn{A=HKH} and \eqn{B=HLH}, then \eqn{HSIC(x,y)=\frac{1}{n^2}Tr(AB)}{HSIC(x,y)=Tr(AB)/n^2}. Permutation test permutes y p times to get \eqn{y_{(p)}} and calculates HSIC(x,y_{(p)}). \eqn{pval = \frac{1(HSIC(x,y)>HSIC(x,y_{(p)}))}{p}}{(HSIC(x,y)>HSIC(x,y_{(p)}))/p}.
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Version: 1.0.1
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
dcov.gamma.Rd: dcov.test
frml.additive.smooth.Rd: gam
frml.full.smooth.Rd: gam
kernelCItest.Rd: skeleton, pc
kpc.Rd: pc, dcov.test, udag2pdag, pcAlgo
regrVonPS.Rd: gam
regrXonS.Rd: gam
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 1.0.1
Check: LazyData
Result: NOTE
'LazyData' is specified without a 'data' directory
Flavors: r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 1.0.1
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘kpcalg_tutorial.Rnw’ using knitr
Error: processing vignette 'kpcalg_tutorial.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'kpcalg_tutorial.tex' failed.
LaTeX errors:
! Undefined control sequence.
l.84 \hlkwd{library}\hldef
{(energy)}
?
! Emergency stop.
! Emergency stop.
l.84
End of file on the terminal!
! ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘kpcalg_tutorial.Rnw’
SUMMARY: processing the following file failed:
‘kpcalg_tutorial.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-x86_64