CohortSurvival: Estimate Survival from Common Data Model Cohorts

Estimate survival using data mapped to the Observational Medical Outcomes Partnership common data model. Survival can be estimated based on user-defined study cohorts.

Version: 0.6.2
Imports: CDMConnector (≥ 1.7.0), omopgenerics (≥ 0.4.1), checkmate, cli, clock, DBI, dplyr, dbplyr, magrittr, broom, PatientProfiles (≥ 1.2.3), rlang (≥ 0.4.11), survival (≥ 3.7.0), stringr, tibble, tidyr, purrr, lifecycle
Suggests: testthat (≥ 3.0.0), CodelistGenerator, roxygen2, knitr, tictoc, rmarkdown, ggplot2, patchwork, cmprsk, duckdb, gt, flextable, scales, visOmopResults (≥ 0.5.0)
Published: 2025-01-22
DOI: 10.32614/CRAN.package.CohortSurvival
Author: Edward Burn ORCID iD [aut, cre] (<https://orcid.org/0000-0002-9286-1128>), Kim López-Güell ORCID iD [aut] (<https://orcid.org/0000-0002-8462-8668>), Marti Catala ORCID iD [aut] (<https://orcid.org/0000-0003-3308-9905>), Xintong Li ORCID iD [aut] (<https://orcid.org/0000-0002-6872-5804>), Danielle Newby ORCID iD [aut] (<https://orcid.org/0000-0002-3001-1478>), Nuria Mercade-Besora ORCID iD [aut] (<https://orcid.org/0009-0006-7948-3747>)
Maintainer: Edward Burn <edward.burn at ndorms.ox.ac.uk>
License: Apache License (≥ 2)
URL: https://darwin-eu-dev.github.io/CohortSurvival/
NeedsCompilation: no
Materials: README
CRAN checks: CohortSurvival results

Documentation:

Reference manual: CohortSurvival.pdf
Vignettes: Single outcome event of interest (source, R code)
Competing risk survival (source, R code)
Further survival analyses (source, R code)

Downloads:

Package source: CohortSurvival_0.6.2.tar.gz
Windows binaries: r-devel: CohortSurvival_0.6.1.zip, r-release: CohortSurvival_0.6.2.zip, r-oldrel: CohortSurvival_0.6.2.zip
macOS binaries: r-release (arm64): CohortSurvival_0.6.1.tgz, r-oldrel (arm64): CohortSurvival_0.6.1.tgz, r-release (x86_64): CohortSurvival_0.6.2.tgz, r-oldrel (x86_64): CohortSurvival_0.6.1.tgz
Old sources: CohortSurvival archive

Reverse dependencies:

Reverse suggests: DrugUtilisation

Linking:

Please use the canonical form https://CRAN.R-project.org/package=CohortSurvival to link to this page.