Provides functions to read, process and visualize pairwise sequence
alignments in the 'PAF' format used by 'minimap2' and other whole-genome aligners.
'minimap2' is described by Li H. (2018) <doi:10.1093/bioinformatics/bty191>.
| Version: |
0.0.2 |
| Depends: |
R (≥ 3.4.4), ggplot2 |
| Imports: |
dplyr, tibble, stringr, rlang |
| Suggests: |
testthat, covr, knitr, ggpubr, rmarkdown, microbenchmark |
| Published: |
2020-12-08 |
| DOI: |
10.32614/CRAN.package.pafr |
| Author: |
David Winter 
[aut, cre] (<https://orcid.org/0000-0002-6165-0029>),
Kate Lee [ctb]
(<https://orcid.org/0000-0002-0886-3746>),
Murray Cox [ctb]
(<https://orcid.org/0000-0003-1936-0236>) |
| Maintainer: |
David Winter <david.winter at gmail.com> |
| BugReports: |
https://github.com/dwinter/pafr/issues |
| License: |
MIT + file LICENSE |
| URL: |
https://dwinter.github.io/pafr/ |
| NeedsCompilation: |
no |
| Materials: |
README NEWS |
| CRAN checks: |
pafr results |