smdi: Perform Structural Missing Data Investigations

An easy to use implementation of routine structural missing data diagnostics with functions to visualize the proportions of missing observations, investigate missing data patterns and conduct various empirical missing data diagnostic tests. Reference: Weberpals J, Raman SR, Shaw PA, Lee H, Russo M, Hammil BG, Toh D, Connolly JG, Dandreo KJ, Tian F, Liu W, Li Jie, Hernandez-Munos JJ, Glynn RJ, Desai RJ (2023, in submission). "A Principled Approach to Characterize and Analyze Partially Observed Confounder Data From Electronic Health Records: A Plasmode Simulation Study."

Version: 0.2.2
Depends: R (≥ 2.10)
Imports: broom, dplyr, fastDummies, forcats, ggplot2, glue, gt, Hotelling, lifecycle, magrittr, methods, mice, naniar, parallel, pROC, randomForest, stringr, survival, tableone, tibble, tidyr, tidyselect
Suggests: gridExtra, gtsummary, here, knitr, reactR, reactable, rmarkdown, simsurv, survminer, usethis, testthat (≥ 3.0.0), vdiffr
Published: 2023-07-17
Author: Janick Weberpals ORCID iD [aut, cre, cph]
Maintainer: Janick Weberpals <jweberpals at bwh.harvard.edu>
BugReports: https://gitlab-scm.partners.org/janickweberpals/smdi/-/issues
License: GPL (≥ 3)
URL: https://janickweberpals.gitlab-pages.partners.org/smdi
NeedsCompilation: no
Materials: NEWS
CRAN checks: smdi results

Documentation:

Reference manual: smdi.pdf
Vignettes: Data generation
Routine structural missing data diagnostics
Multivariate missingness and monotonicity
NARFCS sensitivity analysis
Get started with smdi

Downloads:

Package source: smdi_0.2.2.tar.gz
Windows binaries: r-prerel: smdi_0.2.2.zip, r-release: smdi_0.2.2.zip, r-oldrel: smdi_0.2.2.zip
macOS binaries: r-prerel (arm64): smdi_0.2.2.tgz, r-release (arm64): smdi_0.2.2.tgz, r-oldrel (arm64): smdi_0.2.2.tgz, r-prerel (x86_64): smdi_0.2.2.tgz, r-release (x86_64): smdi_0.2.2.tgz

Linking:

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