vcfppR 0.7.0
- fix parsing BCF when subsetting sample ids and the genomic region at
the same time
- fix
vcfcomp
with stats="nrc"
when the
input vectors have different length
- use the latest version of htslib v1.21
- reduce the size of installation
vcfppR 0.6.0
- upgrade
vcfpp.h
to v0.6.0
- new API
vcfreader$setRegion
- new API
vcfreader$getStatus
vcfppR 0.5.0
- upgrade
vcfpp.h
to v0.5.1
- add
bcfreader$updateSamples()
function
vcfcomp
: can take vcftable
object as
input
vcfcomp
: defaults changed setid=FALSE
- bug fix
vcfppR 0.4.6
- add
vcfplot
function
- fix bug in
vcftable
when FORMAT has unaligned list
- add vignette on
vcfcomp
vcfppR 0.4.5
- add
vcfcomp
function
- fix memory leaks and pass ASAN check
vcfppR 0.4.0
- add
setid
option for vcftable
- patches for upcoming Rtools on windows
vcfppR 0.3.8
vcfppR 0.3.7
- add
vcfreader@rmFormatTag()
- add
vcfreader@samples()
vcftable
supports vartype = ‘sv’
vcfppR 0.3.6
- add
vcfreader::line
- remove
vcfreader::setVariant
- bug fix
setFormatStr
- more units tests
vcfppR 0.3.5
- add vcfreader and vcfwriter
vcfppR 0.3.4
- support filters by variant ID
vcfppR 0.3.3
- use API of vcfpp.h v0.3.1
- set missing vaules in FORMAT to NA
- support filters by QUAL, FILTER and INFO
vcfppR 0.3.0
- First release using vcfpp.h v0.3.0
- add vcftable function
- add vcfsummary function
- add vcfpopgen function