Last updated on 2024-12-22 10:50:20 CET.
| Package | NOTE | OK |
|---|---|---|
| AICcPermanova | 3 | 10 |
| NetworkExtinction | 10 | 3 |
| TroublemakeR | 13 |
Current CRAN status: NOTE: 3, OK: 10
Version: 0.0.2
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
AICc_permanova2.Rd: adonis2
fit_models.Rd: vegdist, adonis2
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Current CRAN status: NOTE: 10, OK: 3
Version: 1.0.3
Check: Rd files
Result: NOTE
checkRd: (-1) ExtinctionOrder.Rd:35: Lost braces
35 | \item{RewiringDist}{a numeric matrix of NxN dimension (N... number of nodes in Network). Contains, for example, phylogenetic or functional trait distances between nodes in Network which are used by the Rewiring argument to calculate rewiring probabilities. If Rewiring == function(x){x}, this matrix is expected to contain probabilities of a connection being present between species-pairs.}
| ^
checkRd: (-1) RandomExtinctions.Rd:52: Lost braces
52 | \item{RewiringDist}{a numeric matrix of NxN dimension (N... number of nodes in Network). Contains, for example, phylogenetic or functional trait distances between nodes in Network which are used by the Rewiring argument to calculate rewiring probabilities. If Rewiring == function(x){x}, this matrix is expected to contain probabilities of a connection being present between species-pairs.}
| ^
checkRd: (-1) RandomExtinctions.Rd:71-72: Lost braces
71 | primary removals. For example, if a network has five species {A,B,
| ^
checkRd: (-1) RandomExtinctions.Rd:72: Lost braces; missing escapes or markup?
72 | ,D,E} and a pre-defined "random" order of removal {C,A,B,E,D} with
| ^
checkRd: (-1) RandomExtinctions.Rd:77: Lost braces; missing escapes or markup?
77 | vector, i.e., {C,A,B}."
| ^
checkRd: (-1) SimulateExtinctions.Rd:38: Lost braces
38 | \item{RewiringDist}{a numeric matrix of NxN dimension (N... number of nodes in Network). Contains, for example, phylogenetic or functional trait distances between nodes in Network which are used by the Rewiring argument to calculate rewiring probabilities. If Rewiring == function(x){x}, this matrix is expected to contain probabilities of a connection being present between species-pairs.}
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Current CRAN status: OK: 13