For biparental, three and four-way crosses Identity by Descent
(IBD) probabilities can be calculated using Hidden Markov Models and
inheritance vectors following Lander and Green
(<https://www.jstor.org/stable/29713>) and Huang
(<doi:10.1073/pnas.1100465108>). One of a series of statistical genetic
packages for streamlining the analysis of typical plant breeding experiments
developed by Biometris.
| Version: |
1.0.7 |
| Depends: |
R (≥ 3.6) |
| Imports: |
data.table, ggplot2, Matrix, rlang, Rcpp, statgenGWAS (≥
1.0.9), stringi |
| LinkingTo: |
Rcpp, RcppArmadillo |
| Suggests: |
rmarkdown, knitr, tinytest |
| Published: |
2024-02-02 |
| DOI: |
10.32614/CRAN.package.statgenIBD |
| Author: |
Martin Boer  [aut]
(<https://orcid.org/0000-0002-1879-4588>),
Bart-Jan van Rossum
[aut, cre]
(<https://orcid.org/0000-0002-8673-2514>),
Wenhao Li [ctb]
(<https://orcid.org/0000-0001-5719-5775>),
Johannes Kruisselbrink
[ctb]
(<https://orcid.org/0000-0003-1673-5725>) |
| Maintainer: |
Bart-Jan van Rossum <bart-jan.vanrossum at wur.nl> |
| BugReports: |
https://github.com/Biometris/statgenIBD/issues |
| License: |
GPL-2 | GPL-3 [expanded from: GPL] |
| URL: |
https://biometris.github.io/statgenIBD/index.html,
https://github.com/Biometris/statgenIBD/ |
| NeedsCompilation: |
yes |
| Materials: |
README NEWS |
| In views: |
Agriculture |
| CRAN checks: |
statgenIBD results |